Given the nature of our interdisciplinary research we maintain a lab with critical mass both in computer science and molecular cell biology. We tend to host 10 – 12 trainees (postdocs, and graduate students) at any time. Trainees are supported by highly professional staff of 6 – 8 members and project managers, who offer unique expertise in bench and desk work and who ensure a longitudinal transfer of lab know-how between generations of trainees.
In such an environment, the graduate students and postdocs who excel are self-driven and willing to engage in rigorous peer-to-peer training. We also welcome applications from student and fellow candidates with explicit interests in dual-lab membership. At UTSW, we have longstanding collaborations with the Fiolka lab and Dean lab. More recently, we have started close interactions with the Rajaram lab. Other, applicant-initiated collaboration arrangements are possible as well.
While the lab is well-funded, the application for fellowships and other forms of independent funding is a mandatory part of the mentorship offered by Gaudenz Danuser, both at the graduate student and postdoctoral fellow levels. They are an invaluable element in building the trainees’ confidence in designing and effectively communicating research projects.

Like all labs in the Lyda Hill Department of Bioinformatics, we compensate postdocs per our highly competitive departmental pay plan. We honor excellence by providing significant bonus payments to postdocs with competitive fellowships. For example, according to the pay plan, K99/R00 awardees typically cross 100K/year salary level in their final postdoc years.

Where our trainees go...

Where our trainees go...

Name and Specialty

First position after training

Orlando Arguello-Miranda
Molecular Biology (K99 Fellow)

Assistant Professor, Plant and Microbial Biology
North Carolina State University, Raleigh

Eric Welf
Systems Biology (K25 Fellow)

Senior Research Associate, Systems Pharmacology
Regeneron, Westchester, New York

Phillippe Roudot
Computer Science (HSFP Fellow)

Assistant Professor, Turing Center for Living Systems
University of Marseille, France

Christoph Burckhardt
Cell Biology (Swiss National Science Foundation Fellow, Roche Research Foundation Fellow)

Senior Research Scientist
Lonza, Visp, Switzerland

Quiyang Shao
Biochemistry

Data Scientist, Wells Fargo

Xiao Ma
Mechanical Engineering

Assistant Professor, Bioengineering
New York University, New York

Maria Bagonis
Chemistry

Postdoctoral Researcher, Computer Science & Psychiatry
University of North Carolina, Chapel Hill

Postdocs

Kevin Dean
Chemistry (NIH F32 awardee)

Assistant Professor, Lyda Hill Department of Bioinformatics
UT Southwestern medical Center, Dallas

Assaf Zaritsky
Computer Science

Assistant Professor, Department of Software and Information Systems Engineering
Ben-Gurion University of the Negev, Be’er-Sheva, Israel

Zhengwen Zhang
Bioengineering

Master’s Program in Computer Science
Southern Methodist University, Dallas

Zhuo Gen
Bioengineering

Data Analyst
Censeo health, Dallas

Sangyoon Han
Mechanical Engineering

Assistant Professor, Biomedical Engineering
Michigan tech University, Houghton, Michigan

Claudia Schafer
Cell Biology

Research Associate,
MIT/Koch Institute for Cancer Research, Boston, Massachusetts

Liya Ding
Computer Science

Research Associate,
Allen Institute for Cell Science, Seattle, Washington

Marco Vilela
Applied Mathematics (NIH F32 awardee)

Research Faculty,
Brown University, Providence, Rhode Island

Deepak Chitajallu
Computer Science

Staff Scientist,
Kitware Inc. Chapel Hill, North Carolina

Francois Aguet
Computer Science (SNSF awardee)

Staff Scientist,
Broad Institute, Boston, Massachusetts

Alexis Lomakin
Cell Biology (Leukemia & Lymphoma Society Fellowship awardee)

Group Leader, King’s Prize Fellow
Kings College London, London, UK

Nancy Costigliola
Cell Biology

Second Postdoc with Tim Mitchison,
Harvard Medical School, Boston, Massachusetts

Kwonmoo Lee
Physics and Biochemistry (NIH F32 awardee)

Assistant Professor, Bioengineering
Worcester Polytechnical Institute, Massachusetts

Michelle Mendoza
Cell Biology (NIH K25 awardee, joint postdoc with John Blenis)

Assistant Professor, Cell Biology
UC San Francisco, California

Laura-Anne Lowery
Developmental Biology (NIH K99/R00 awardee, joint postdoc with Davie Van Vactor)

Assistant Professor, Cell Biology
Boston College, Massachusetts

Uli Schmid
Biophysics (DFG awardee)

Research Project Manager,
TWT Science and Innovation, Stuttgart, Germany

Sylvain Berlemont
Computer Science

Founder & CEO,
Keen Eye Technologies, Paris, France

Allen Liu
Biophysics (Leukemia and Lymphoma Society Fellowship, NIH K99/R00 awardee, joint postdoc with Sandra Schmid)

Assistant Professor, Mechanical Engineering
U. Michigan, Ann Arbor, Michigan

Achim Besser
Biophysics (DFG awardee)

Research Group Leader,
BASF Research, Ludwigshafen, Germany

Christian Dittrich
Chemistry (Novartis Research Foundation Fellowship)

Project Manager,
Merck Millipore, Schaffhausen, CH

Andrea Bacconi
Cell Biology (SNSF awardee)

Second postdoc with Velia Fowler
TSRI, La Jolla, California

Mohsen Sabouri
Physics

Staff Scientist,
TSRI, La Jolla, California

Michelle Mendoza
Cell Biology (NIH K25 awardee, joint postdoc with John Blenis)

Assistant Professor, Cell Biology
UC San Francisco, California

Khuloud Jaqaman
Physics (Helen Hay Whitney Foundation fellow)

Assistant Professor, Biophysics
UT Southwestern Medical Center, Dallas, Texas

Shann-Ching Chen
Computer Science

Staff Scientist,
Institute for Computational Health Sciences, UC San Francisco

Pascal Vallotton
Biophysics

Assistant Professor, Physics
University of Denver, Colorado

Dinah Loerke
Biophysics

Assistant Professor, Bioengineering
Carnegie Mellon University, Pittsburgh, Pennsylvania

Ge Yang
Applied Mathematics

Assistant Professor, Cell Biology
Einstein College of Medicine, New York City

Lin Ji
Applied Mathematics

Medical Engineering Group Lead,
Novartis AG, Basel, CH

Matthias Machacek
Mechanical Engineering (SNSF awardee, Novartis Research Foundation awardee)

Lab Head,
CSIRO, Sydney, Australia

Gabor Csucs
Biochemistry

Director,
Light Microscopy Center, ETH Zurich, Switzerland

Name and Specialty

First position after training

Xuexia Jiang
Mathematical Modeling for subcellular Signaling

Medical Student,
UT Southwestern Medical Center, Dallas, Texas

Ning Zhang
Computational and Systems Biology

Postdoctoral Fellow in Yuan Lao Lab,
Feinberg School of Medicine, Northwestern University, Chicago, Illinois

Jin Suk Park
Cancer Biology

Postdoctoral Fellow in Joan Massagué lab,
Sloan Kettering Institute, New York, New York

Ashwathi (Abbee) Mohan
Cancer Biology (NIH F30 awardee)

Medical student,
Washington University School of Medicine, St. Louis, Missouri

Youbean Oak
Molecular Biology

Simon-Kucher & Partners Consulting, Boston, Massachusetts

Pei-Hsin Hsu
Mathematics and Molecular Biology

Postdoctoral fellow in Angelika Amonrsquo lab,
HHMI/MIT, Boston, Massachusetts

Daniel Nunez
Bioengineering (NIH F31 awardee)

Postdoctoral Fellow,
U. Michigan, Ann Arbor, Michigan

Graduate Students


Hunter Elliott
Biophysics

Director, Image Data Analysis Core Facility
Harvard Medical School, Boston, Massachusetts

James Lin
Cell Biology

Founder and CTO, XCell Biosciences,
South San Francisco, California

Kathryn Applegate
Bioinformatics (NSF fellow)

Program Director,
BioLogos Forum

Alexandre Matov
Electrical Engineering

Postdoctoral Fellow in Torsten Wittmann lab,
UC San Francisco, California

Jonas Dorn
Biophysics (Roche Research Foundation awardee)

Postdoctoral Fellow in Paul Maddox’s lab,
IRIC, Montreal, Canada

Toru Fischbach
Biophysics

Synthes, Solothurn, Switzerland

Aaron Ponti
Biophysics

Staff Scientist,
Friedrich Miescher Institute, Basel, Switzerland

Claude Berney
Biophysics

Product Manager,
Johnson & Johnson Inc., Ostermundigen, Switzerland

Dominik Thomann
Biophysics

Research Engineer,
X-Rite, Regensdorf, Switzerland

Jaewon Huh
Statistics (HFSP Fellow)

Data Scientist, The Trade Desk
New York

David Saucier
Biomedical Engineering, (NIH F31 awardee)

Senior Technical Staff, Systems Research and Analysis
Sandia National Laboratories

Meghan Driscoll
Physics (NIH F32 and K99 awardee)

Assistant Professor, Pharmacology
University of Minnesota